Bioinformatics CLI tools

02/03/00


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Table of Contents

Bioinformatics CLI tools

Introduction - 1

Introduction - 2

What are command line tools?

But….

Why these limits?

Boundaries of search

Overview categories

Converters…. - 1 -

Converters…. - 2 -

Database Management

PPT Slide

Sequence Assembly/Editing -1-

Sequence Assembly/Editing -2-

Database Searching - 1 -

Database Searching - 2 -

Visualisation - 1 -

Visualisation - 2 -

Structure Prediction

DRAGON -- comp. modelling

Phylogenetic Analysis

Gene Recognition

Protein Analysis

Example Pipeline in AppLab

Final remarks - 1 -

Final remarks - 2 -

Acknowledgements

Questions and comments

Author: Jean-Jack Riethoven

Email: jean-jack riethoven

Home Page: http://www.riethoven.org/